The Synapse and Brain Regeneration
Dan Lewis Foundation | Winter 2023

The past decade has brought new hope that the damaged brain can heal itself. It is now within the realm of possibility that scientists will design medicines that promote brain regeneration, even long after a severe brain injury. These new medicines will be engineered to use the brain’s own genetic machinery to stimulate regeneration and functional recovery. In the last edition of the DLF newsletter, 1 we explored progress toward creating medicines that allow nerve cells to regrow. Here, we’ll explore another primary research goal, the development of medicines that induce the growth of new connections among the nerve cells in the brain.


The idea that a brain is comprised of interconnected nerve cells (‘neurons’) carrying small electrical currents was first proposed at the end of the 19th century.2,3  In the 1920s, it was first demonstrated that these electrical currents are transmitted between neurons by chemical substances (‘neurotransmitters’) acting in the minute space between neurons (‘synapses’).4 We now understand that ~600 trillion synaptic connections among 100 billion neurons create the brain’s function!5 Perception, learning, memory, thought, emotion, and movement result from neurotransmitters’ symphony of coordinated synaptic activation of neuronal networks.


Synaptic connections must be stable and durable to store memories and learning. But synapses must also be dynamic, strengthening some connections while weakening others in response to new experiences. There is a critical balance between stability and so-called ‘plasticity,’ the capacity of synapses to grow and change.  During some phases of development, the organism is most advantaged by extreme plasticity; early in life, the brain’s interconnections must rapidly and continuously evolve. Later, it is advantageous that synaptic structures become more durable. It is, in fact, harder to ‘teach an old dog new tricks’, since synaptic networks become less flexible with age. The genetic programs that control synaptic activity determine the neuronal network’s relative degree of stability or plasticity. Maintaining a balance between stability and plasticity is critical for healthy brain function. Plasticity is needed for learning, and stability is required to retain the benefits of new learning.


In recent years, there has been a growing understanding of the normal regulation of synaptic formation, the role of specific neurotransmitters in synaptic function, and the impact of various classes of drugs on the formation of new synapses.6 Drugs affecting the synapse may modify the release or uptake of specific neurotransmitters or alter the activity of genetic systems that control the production or degradation of neurotransmitters. Many different neurotransmitters have been identified, and many other drugs have been identified which alter neurotransmitters or modify the formation of synapses and, as a result, change synaptic function. 


A significant acquired brain injury that results in loss of function has disrupted both neurons and the synaptic connections between them. Severe injuries create conditions in brain tissue that disrupt synaptic activity in many ways immediately after injury and over the months and years after the acute event.7,8 Injured tissue can release substances that can cause overactivity of synapses, the disruption of pre-existing synapses, or a reduction in the ability to create new synapses.


For functional recovery to occur after a severe brain injury, new synapses must be created as other brain regions are recruited to compensate for lost function. There is now a sufficiently detailed understanding of the regulation of synaptic neurotransmission to permit the development of drugs that stimulate the formation of new synapses (“synaptogenesis”) after a significant brain injury.  Recent studies indicate it is possible to stimulate the creation of new synapses in the brain.9,10 Several studies are underway to explore the value of drug-induced synaptic plasticity in promoting functional recovery after a severe brain injury. Other investigators have directly modified gene transcription to upregulate synaptogenesis.11 As the genomic and transcriptional controls of synaptogenesis are further clarified, investigators will inevitably seek to directly upregulate the formation of new synapses and, thereby, induce functional recovery after severe brain injury. The DLF views these lines of inquiry as promising and has, accordingly, prioritized the stimulation of synaptogenesis as a core strategy of brain regeneration research.


Another strategy to restore function after a brain injury is to replace lost neurons by either stimulating new neuronal proliferation or by transplanting cells that can become neurons in the recipient’s brain.12 If new neurons or neuronal precursors are introduced into an injured brain, it will be necessary to create a microenvironment that optimizes the formation of new synapses in response to intensive retraining. Some of the same drugs that stimulate synaptic plasticity may also be essential to condition the brain as it seeks to incorporate new neurons into damaged tissues. More to come about this research frontier in a future DLF newsletter. 


References


  1. Dan Lewis Foundation Newsletter, Fall 2022.
  2. Scheuerlein, H., Henschke, F. & Köckerling, F. Wilhelm von Waldeyer-Hartz—A Great Forefather: His Contributions to Anatomy with Particular Attention to ‘His’ Fascia. Frontiers in Surgery 4, (2017).
  3. López-Muñoz, F., Boya, J. & Alamo, C. Neuron theory, the cornerstone of neuroscience, on the centenary of the Nobel Prize award to Santiago Ramón y Cajal. Brain Res. Bull. 70, 391–405 (2006).
  4. York, G. K., Iii. OTTO LOEWI: DREAM INSPIRES A NOBEL-WINNING EXPERIMENT ON NEUROTRANSMISSION. Neurology Today 4, 54 (2004).
  5. Wanner, M. 600 trillion synapses and Alzheimers disease. The Jackson Laboratory https://www.jax.org/news-and-insights/jax-blog/2018/december/600-trillion-synapses-and-alzheimers-disease.
  6. Kozorovitskiy, Y., Peixoto, R., Wang, W., Saunders, A. & Sabatini, B. L. Neuromodulation of excitatory synaptogenesis in striatal development. Elife 4, (2015).
  7. Jamjoom, A. A. B., Rhodes, J., Andrews, P. J. D. & Grant, S. G. N. The synapse in traumatic brain injury. Brain 144, 18–31 (2021).
  8. Merlo, L. et al. Alteration in synaptic junction proteins following traumatic brain injury. J. Neurotrauma 31, 1375–1385 (2014).
  9. Ng, S. Y. & Lee, A. Y. W. Traumatic Brain Injuries: Pathophysiology and Potential Therapeutic Targets. Front. Cell. Neurosci. 13, 528 (2019).
  10. Burlingham, S. R. et al. Induction of synapse formation by de novo neurotransmitter synthesis. Nat. Commun. 13, 3060 (2022).
  11. Sahin, G. S. et al. Leptin stimulates synaptogenesis in hippocampal neurons via KLF4 and SOCS3 inhibition of STAT3 signaling. Mol. Cell. Neurosci. 106, 103500 (2020).
  12. Xiong, L.-L. et al. Neural Stem Cell Transplantation Promotes Functional Recovery from Traumatic Brain Injury via Brain Derived Neurotrophic Factor-Mediated Neuroplasticity. Mol. Neurobiol. 55, 2696–2711 (2018).
A gold trophy with a laurel wreath around it.
By Dan Lewis Foundation April 2, 2025
For the third consecutive year, the Dan Lewis Foundation for Brain Regeneration is proud to announce the DLF Prize competition. The 2025 DLF Prize, a $20,000 award, will recognize an outstanding early career scientist (2 to 5 years post-doc) conducting innovative research in neuroscience, pharmacology, or biotechnology. This prestigious prize honors researchers whose work aligns with the DLF mission to drive breakthroughs in neural regeneration and repair. The current research priorities of the DLF are: Pharmacological Reactivation of Neural Repair: Research into pharmacological methods of reactivating or augmenting synaptogenesis, neurogenesis or axonal repair. Cell-Based Cortical Repair: Investigating the potential of derived cortical neurons to restore function in damaged cortical regions. Transcriptomics of Neural Recovery: Characterizing transcriptomic profiles of cortical neurons in the recovery phase following brain injury to identify pathways that drive repair. Molecular Inhibitor Targeting: Advancing anti-sense oligonucleotides (ASO’s) or small-molecule therapeutics designed to downregulate inhibitors of neural regeneration in the cortex or spinal cord. Application for the 2025 DLF Prize can be made by going to our website— danlewisfoundation.org —and clicking on the Tab “ 2025 DLF Prize ”. This will bring you into the application portal. The application portal opened in March, 2025 and will remain open through May 31st. Once in the portal, you will find complete information about the DLF prize, eligibility requirements, and an application form which can be filled in and submitted online. The winner of the 2023 DLF Prize, Dr. Roy Maimon, continues his research indicating that downregulation of PTBP1, an RNA-binding protein, can convert glial cells into neurons in the adult brain (Maimon et al. 2024) .* Dr. Maimon, currently a post-doc at the University of California, San Diego is currently interviewing for a faculty position at several prominent neuroscience departments. The winner of the 2024 DLF Prize, Dr. William Zeiger is a physician-scientist in the Department of Neurology, Movement Disorders Division, at UCLA. Dr. Zeiger has expertise in interrogating neural circuits using a classic “lesional neurology” approach. He states, “Our lab remains focused on understanding how neural circuits become dysfunctional after lesions to the cortex and on investigating novel circuit-based approaches to reactivate and restore damaged cortex”. * Maimon, Roy, Carlos Chillon-Marinas, Sonia Vazquez-Sanchez, Colin Kern, Kresna Jenie, Kseniya Malukhina, Stephen Moore, et al. 2024. “Re-Activation of Neurogenic Niches in Aging Brain.” BioRxiv. https://doi.org/10.1101/2024.01.27.575940.
By Dan Lewis Foundation April 2, 2025
Alan was injured in 2021, at age 42. An art teacher in Lakewood, Colorado, Alan was riding his bicycle after school and was crossing at an intersection when a truck turned into the crosswalk area and hit him. Alan reports no memory of the event but has been told this is what happened. Alan says “My frontal lobe took the brunt of the impact, particularly the left frontal lobe”. Alan had a 2 ½ week stay at a nearby hospital where he, “re-learned to talk, to walk, and drink”-- although again he reports no memory of his stay there. Alan was then transferred to Craig Rehabilitation Hospital, in Englewood, Colorado. Alan says, “The only reason I knew I was at Craig is that I rolled over in bed and saw “Welcome to Craig” on the dry erase board.” During this stage of recovering, Alan repeatedly denied that he had been in an accident. Twice he tried to leave Craig on his own accord despite his wife’s and his therapists’ assurances that it was important for him to stay to recuperate from his injuries. Alan’s wife was 8 months pregnant at the time of his accident and gave birth to their son while Alan was an inpatient at Craig. Alan’s wife brought his newborn son to visit him days after the birth and Alan held him while sitting in his wheelchair, but Alan wistfully reports this is another thing he can’t remember. Alan reports that he still has significant difficulties with memory. Alan has also experienced several other neuropsychological difficulties. He states that for months after his injury, he could not experience emotion. “I could not laugh, I couldn’t cry.” Even after three years, his emotional experience is constricted. However, an emotion that is sometimes elevated is irritation and anger. Sometimes, dealing with people can be difficult because he may have temper flare-ups with little reason. This is something that Alan regrets and he is working hard with his neuropsychologist to improve the regulation of his emotions. Alan also has difficulty with organization, motivation, and distractibility. Earlier in his recovery, he had trouble sequencing and had difficulty carrying out personal and household routines. Alan has benefited greatly from therapy and his own hard work to make improvements in these areas. A chief reason that Alan works so hard in his recovery is so that he can be a good father to his son who is now almost 3 years old. He recognizes that it is important not to get frustrated when it seems that he can’t provide what his son wants or needs at a given moment. “I’m trying to raise my son the best I can…he’s at such a pivotal time in his life.” Alan’s financial situation was helped for a time by Social Security Disability Insurance payments but these payments ended. He is trying to get SSDI reinstated but the process of doing so is confusing and is taking a lot of time. Alan returned to work about 11 months ago at a liquor store (after about 2 years of not being able to work), the same store where he previously worked part time while teaching. He works in the wine department. “I sell wine and make recommendations.” When asked for advice to other brain injury survivors, Alan’s words were: “No matter how confused or upset you are or how frustrated you get, keep pressing on and moving forward because there is light at the end of the tunnel even though it may seem long. Keep moving forward and don’t give up no matter what anyone says to you”. Alan added that supports for individuals with brain injury are very important. He has found support groups, retreats, and seminars/events where brain injury survivors can share their experience to be very helpful. The volunteer work he does at Craig Hospital has been valuable for him. Alan is an inspiring individual. Despite having scarce memory of his accident and some confusion about the functional losses he has experienced, Alan has worked hard to make his recovery as complete as possible. He continues to work hard to progress and to express gratitude for those who have assisted him along the way.